IMIS - Marine Onderzoeksgroepen

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prof. dr. Vandamme, Peter
ORCID ResearcherID

Instituut
Publicaties (30)

Universiteit Gent; Faculteit Wetenschappen; Vakgroep Biochemie en Microbiologie; Laboratorium voor Microbiologie, meer

Contact op het instituut:
Tel.: +32-(0)9-264 51 13
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A1 publicaties (29) [show]
Ratnawati, S.E.; Kuuliala, L.; Verschuere, N.; Cnockaert, M.; Vandamme, P.; Devlieghere, F. (2024). The exploration of dominant spoilage bacteria in blue mussels (Mytilus edulis) stored under different modified atmospheres by MALDI-TOF MS in combination with 16S rRNA sequencing. Food Microbiol. 118: 104407. https://dx.doi.org/10.1016/j.fm.2023.104407, meer Thuy, D.T.B.; An, N.T.; Jayasena, V.; Vandamme, P. (2022). A comprehensive investigation into the production of gamma-aminobutyric acid by Limosilactobacillus fermentum NG16, a tuna gut isolate. Acta Alimentaria 51(2): 302-311. https://dx.doi.org/10.1556/066.2022.00065, meer Vanwijnsberghe, S.; Peeters, C.; Cnockaert, M.; De Canck, E.; Vandamme, P. (2022). Paraburkholderia gardini sp. nov. and Paraburkholderia saeva sp. nov.: Novel aromatic compound degrading bacteria isolated from garden and forest soil samples. Syst. Appl. Microbiol. 45(3): 126318. https://dx.doi.org/10.1016/j.syapm.2022.126318, meer Depoorter, E.; Coenye, T.; Vandamme, P. (2021). Biosynthesis of ditropolonyl sulfide, an antibacterial compound produced by Burkholderia cepacia complex strain R-12632. Appl. Environ. Microbiol. 87(22): e01169-21. https://dx.doi.org/10.1128/aem.01169-21, meer Dumolin, C.; Peeters, C.; De Canck, E.; Boon, N.; Vandamme, P. (2021). Network analysis based on unique spectral features enables an efficient selection of genomically diverse operational isolation units. Microorganisms 9(2): 416. https://dx.doi.org/10.3390/microorganisms9020416, meer Vanwijnsberghe, S.; Peeters, C.; De Ridder, E.; Dumolin, C.; Wieme, A.D.; Boon, N.; Vandamme, P. (2021). Genomic aromatic compound degradation potential of novel Paraburkholderia species: Paraburkholderia domus sp. nov., Paraburkholderia haematera sp. nov. and Paraburkholderia nemoris sp. nov. International Journal of Molecular Sciences 22(13): 7003. https://dx.doi.org/10.3390/ijms22137003, meer Dumolin, C.; Peeters, C.; Ehsani, E.; Tahon, G.; De Canck, E.; Cnockaert, M.; Boon, N.; Vandamme, P. (2020). Achromobacter veterisilvae sp. nov., from a mixed hydrogen-oxidizing bacteria enrichment reactor for microbial protein production. Int. J. Syst. Evol. Microbiol. 70(1): 530-536. https://dx.doi.org/10.1099/ijsem.0.003786, meer Murray, A. E.; Freudenstein, J.; Gribaldo, S.; Hatzenpichler, R.; Hugenholtz, P.; Kämpfer, P.; Konstantinidis, K. T.; Lane, C. E.; Papke, R. T.; Parks, D. H.; Rossello-Mora, R.; Stott, M. B.; Sutcliffe, I. C.; Thrash, J. C.; Venter, S. N.; Whitman, W. B.; Acinas, S. G.; Amann, R. I.; Anantharaman, K.; Armengaud, J.; Baker, B. J.; Barco, R. A.; Bode, H. B.; Boyd, E. S.; Brady, C. L.; Carini, P.; Chain, P. S. G.; Colman, D. R.; DeAngelis, K. M.; de los Rios, Ma. A.; Estrada-de los Santos, P.; Dunlap, C. A.; Eisen, J. A.; Emerson, D.; Ettema, T. J. G.; Eveillard, D.; Girguis, P. R.; Hentschel, U.; Hollibaugh, J. T.; Hug, L. A.; Inskeep, W. P.; Ivanova, E. P.; Klenk, H.-P.; Li, W.-J.; Lloyd, K. G.; Löffler, F. E.; Makhalanyane, T. P.; Moser, D. P.; Nunoura, T.; Palmer, M.; Parro, V.; Pedrós-Alió, C.; Probst, A. J.; Smits, T. H. M.; Steen, A. D.; Steenkamp, E. T.; Spang, A.; Stewart, F. J.; Tiedje, J. M.; Vandamme, P.; Wagner, M.; Wang, F.-P.; Hedlund, B. P.; Reysenbach, A.-L. (2020). Roadmap for naming uncultivated Archaea and Bacteria. Nature Microbiology 5(8): 987-994. https://dx.doi.org/10.1038/s41564-020-0733-x, meer Thuy, D.T.B.; Nguyen, A.T.; Khoo, K.S.; Chew, K.W.; Cnockaert, M.; Vandamme, P.; Ho, Y.-C.; Huy, N.D.; Cocoletzi, H.H.; Show, P.L. (2020). Optimization of culture conditions for gamma-aminobutyric acid production by newly identified Pediococcus pentosaceus MN12 isolated from ‘mam nem’, a fermented fish sauce. Bioengineered 12(1): 54-62. https://dx.doi.org/10.1080/21655979.2020.1857626, meer Van Landuyt, J.; Cimmino, L.; Dumolin, C.; Chatzigiannidou, I.; Taveirne, F.; Mattelin, V.; Zhang, Y.; Vandamme, P.; Scoma, A.; Williamson, A.; Boon, N. (2020). Microbial enrichment, functional characterization and isolation from a cold seep yield piezotolerant obligate hydrocarbon degraders. FEMS Microbiol. Ecol. 96(9): fiaa097. https://dx.doi.org/10.1093/femsec/fiaa097, meer Ehsani, E.; Dumolin, C.; Arends, J.B.A.; Kerckhof, F.-M.; Hu, X.; Vandamme, P.; Boon, N. (2019). Enriched hydrogen-oxidizing microbiomes show a high diversity of co-existing hydrogen-oxidizing bacteria. Appl. Microbiol. Biotechnol. 103(19): 8241-8253. https://dx.doi.org/10.1007/s00253-019-10082-z, meer Tanaka, R.; Cleenwerck, I.; Mizutani, Y.; Iehata, S.; Bossier, P.; Vandamme, P. (2017). Arcobacter haliotis sp. nov., isolated from abalone species Haliotis gigantea. Int. J. Syst. Evol. Microbiol. 67(8): 3050-3056. https://dx.doi.org/10.1099/ijsem.0.002080, meer Vekeman, B.; Kerckhof, F.-M.; Cremers, G.; de Vos, P.; Vandamme, P.; Boon, N.; Op den Camp, H.J.M.; Heylen, K. (2016). New Methyloceanibacter diversity from North Sea sediments includes methanotroph containing solely the soluble methane monooxygenase. Environ. Microbiol. 18(12): 4523-4536. http://dx.doi.org/10.1111/1462-2920.13485, meer Tanaka, R.; Cleenwerck, I.; Mizutani, Y.; Iehata, S.; Shibata, T.; Miyake, H.; Mori, T.; Tamaru, Y.; Ueda, M.; Bossier, P.; Vandamme, P. (2015). Formosa haliotis sp. nov., a brown-alga-degrading bacterium isolated from the gut of the abalone Haliotis gigantea. Int. J. Syst. Evol. Microbiol. 65: 4388-4393. dx.doi.org/10.1099/ijsem.0.000586, meer González, M.; Villanueva, M.P.; Debruyne, L.; Vandamme, P.; Fernández, H. (2011). Campylobacter insulaenigrae: first isolation report from south american sea lion (Otaria flavescens, (Shaw, 1800). Braz. J. Microbiol. 42(1): 261-265. http://dx.doi.org/10.1590/S1517-83822011000100033, meer Parot, S.; Vandecandelaere, I.; Cournet, A.; Delia, M.; Vandamme, P.; Berge, M.; Rogues, C.; Bergel, A. (2011). Catalysis of the electrochemical reduction of oxygen by bacteria isolated from electro-active biofilms formed in seawater. Bioresour. Technol. 102(1): 304-311. https://dx.doi.org/10.1016/j.biortech.2010.06.157, meer Debruyne, L.; Broman, T.; Bergström, S.; Olsen, B.; On, S.L.W.; Vandamme, P. (2010). Campylobacter volucris sp. nov., isolated from black-headed gulls (Larus ridibundus). Int. J. Syst. Evol. Microbiol. 60: 1870-1875. dx.doi.org/10.1099/ijs.0.013748-0, meer Erable, B.; Vandecandelaere, I.; Faimali, M.; Delia, M.; Etcheverry, L.; Vandamme, P.; Bergel, A. (2010). Marine aerobic biofilm as biocathode catalyst. Bioelectrochemistry 78(1): 51-56. dx.doi.org/10.1016/j.bioelechem.2009.06.006, meer Faimali, M.; Chelossi, E.; Pavanello, G.; Benedetti, A.; Vandecandelaere, I.; De Vos, P.; Vandamme, P.; Mollica, A. (2010). Electrochemical activity and bacterial diversity of natural marine biofilm in laboratory closed-systems. Bioelectrochemistry 78(1): 30-38. dx.doi.org/10.1016/j.bioelechem.2009.04.012, meer Vandecandelaere, I.; Nercessian, O.; Faimali, M.; Segaert, E.; Mollica, A.; Achouak, W.; De Vos, P.; Vandamme, P. (2010). Bacterial diversity of the cultivable fraction of a marine electroactive biofilm. Bioelectrochemistry 78(1): 62-66. dx.doi.org/10.1016/j.bioelechem.2009.07.004, meer Debruyne, L.; On, S.L.W.; De Brandt, E.; Vandamme, P. (2009). Novel Campylobacter lari-like bacteria from humans and molluscs: description of Campylobacter peloridis sp. nov., Campylobacter lari subsp. concheus subsp. nov. and Campylobacter lari subsp. lari subsp. nov. Int. J. Syst. Evol. Microbiol. 59: 1126-1132. https://dx.doi.org/10.1099/ijs.0.000851-0, meer Vandecandelaere, I.; Segaert, E.; Mollica, A.; Faimali, M.; Vandamme, P. (2009). Phaeobacter caeruleus sp/ nov., a blue-coloured, colony-forming bacterium isolated from a marine electroactive biofilm. Int. J. Syst. Evol. Microbiol. 59: 1209-1214. dx.doi.org/10.1099/ijs.0.002642-0, meer Vandecandelaere, I.; Nercessian, O.; Segaert, E.; Achouak, W.; Mollica, A.; Faimali, M.; Vandamme, P. (2009). Nautella italica gen. nov., sp. nov., isolated from a marine electroactive biofilm. Int. J. Syst. Evol. Microbiol. 59: 811-817. dx.doi.org/10.1099/ijs.0.002683-0, meer Leisner, J.J.; Vogensen, F.K.; Kollmann, J.; Aideh, B.; Vandamme, P.; Vancanneyt, M.; Ingmer, H. (2008). α-Chitinase activity among lactic acid bacteria. Syst. Appl. Microbiol. 31(2): 151-156. https://dx.doi.org/10.1016/j.syapm.2008.03.003, meer Vandecandelaere, I.; Nercessian, O.; Segaert, E.; Achouak, W.; Faimali, M.; Vandamme, P. (2008). Ruegeria scottomollicae sp. nov., isolated from a marine electroactive biofilm. Int. J. Syst. Evol. Microbiol. 58: 2726-2733. dx.doi.org/10.1099/ijs.0.65843-0, meer Vandecandelaere, I.; Segaert, E.; Mollica, A.; Faimali, M.; Vandamme, P. (2008). Leisingera aquimarina sp. nov., isolated from a marine electroactive biofilm, and emended descriptions of Leisingera methylohalidivorans Schaefer et al. 2002, Phaeobacter daeponensis Yoon et al. 2007 and Phaeobacter inhibens Martens et al. 2006. Int. J. Syst. Evol. Microbiol. 58: 2788-2793. dx.doi.org/10.1099/ijs.0.65844-0, meer Vandecandelaere, I.; Nercessian, O.; Segaert, E.; Achouak, W.; Mollica, A.; Faimali, M.; De Vos, P.; Vandamme, P. (2008). Alteromonas genovensis sp. nov., isolated from a marine electroactive biofilm and emended description of Alteromonas macleodii Baumann et al. 1972 (Approved Lists 1980). Int. J. Syst. Evol. Microbiol. 58: 2589-2596. dx.doi.org/10.1099/ijs.0.65691-0, meer Van Trappen, S.; Tan, T.-L.; Samyn, E.; Vandamme, P. (2005). Alcaligenes aquatilis sp. nov., a novel bacterium from sediments of the Weser Estuary, Germany, and a salt marsh on Shem Creek in Charleston Harbor, USA. Int. J. Syst. Evol. Microbiol. 55: 2571-2575. dx.doi.org/10.1099/ijs.0.63849-0, meer Endtz, H.P.; Vliegenthart, J.S.; Vandamme, P.; Weverink, H.W.; van den Braak, N.P.; Verbrugh, H.A.; van Belkum, A. (1997). Genotypic diversity of Campylobacter lari isolated from mussels and oysters in The Netherlands. Intern. J. Food Microbiol. 34(1): 79-88. https://hdl.handle.net/10.1016/S0168-1605(96)01174-9, meer
Thesis (co-)promotor [show]
Vekeman, B. (2016). Methanotrophic microbiomes from North Sea sediment. PhD Thesis. Faculty of Sciences, Ghent University: Gent. ISBN 978-94-6197-399-3. 209 pp., meer