IMIS - Marine Onderzoeksgroepen

dr. van de Koppel, Johan
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Dr. Johan van de Koppel, is senior scientist at the KNAW, and has a large number of publications in international peer reviewed scientific journals (h-index 14). He is trained as a theoretical ecologists and has specialised in using (conceptual) models for understanding landscape development with special attention for pattern formation.

Koninklijk Nederlands Instituut voor Onderzoek der Zee; Estuarine and Delta Systems (EDS), meer

Functie: Senior onderzoeker
Contact op het instituut:
Tel.: +31-(0)113-57 74 55
E-mail:

Marine Biodiversity and Ecosystem Functioning - EU Network of Excellence, meer

Herman P. 2005: Blimp pictures oysterbanks Eastern Scheldt 2005 (NIOO-CEME). Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1230, meer
Herman P. 2006: Blimp pictures from diatom biofilms at the Kapellebank 2006 (NIOO-CEME). Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1232, meer
Herman P. 2006: Blimp pictures of mussel beds in the Menai strait near Bangor (NIOO-CEME). Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1233, meer
Oblique pictures Zeeland: mudflats and cliff erosion tour (NIOO-CEME), meer
Oblique pictures taken at Waarde Schor (NIOO-CEME), meer
Oblique pictures taken at Zandkreek: oysterbanks, seagrass, mussels (NIOO-CEME), meer
Oblique pictures taken at a wetland site in Maine (NIOO-CEME), meer
Oblique pictures taken at the Kapellebank (NIOO-CEME), meer
Oblique pictures taken at the Paulinapolder (NIOO-CEME), meer
Oblique pictures taken at the Plaat van Walsoorden, The Netherlands (NIOO-CEME), meer
Oblique pictures taken from oysterbanks in the Scheldt Estuary (NIOO-CEME), meer
Oblique pictures: fieldwork at Ellewoutsdijk, The Netherlands (NIOO-CEME), meer

A1 publicaties (109) [show]
Cornacchia, L.; Bakker, J.P.; Koppenaal, E.C.; De Groot, A.V.; Olff, H.; van de Koppel, J.; van der Wal, D.; Bouma, T.J. (2024). Spatial and temporal variation in long-term sediment accumulation in a back-barrier salt marsh. Geomorphology (Amst.) 456: 109191. https://dx.doi.org/10.1016/j.geomorph.2024.109191, meer Cornacchia, L.; van de Vijsel, R.C.; van der Wal, D.; Ysebaert, T.; Sun, J.; Van Prooijen, B.; de Vet, P.L.M.; Liu, Q.-X.; van de Koppel, J. (2024). Vegetation traits and biogeomorphic complexity shape the resilience of salt marshes to sea-level rise. Commun. Earth Environ. 5(1): 658. https://dx.doi.org/10.1038/s43247-024-01829-2, meer Silliman, B.R.; Hensel, M. J.S.; Gibert, J.P.; Daleo, P.; Smith, C.S.; Wieczynski, D.J.; Angelini, C.; Paxton, A.B.; Adler, A.M.; Zhang, Y.S.; Altieri, A.H.; Palmer, T.M.; Jones, H.P.; Gittman, R.K.; Griffin, J.N.; O’Connor, M.I.; van de Koppel, J.; Poulsen, J.R.; Rietkerk, M.; He, Q.; Bertness, M.D.; van der Heide, T.; Valdez, S.R. (2024). Harnessing ecological theory to enhance ecosystem restoration. Curr. Biol. 34(9): R418-R434. https://dx.doi.org/10.1016/j.cub.2024.03.043, meer Stoorvogel, M.; van Belzen, J.; Temmerman, S.; Wiesebron, L.E.; Fivash, G.S.; van Ijzerloo, L.; van de Koppel, J.; Bouma, T. (2024). Salt marshes for nature-based flood defense: Sediment type, drainage, and vegetation drive the development of strong sediment beds. Ecol. Eng. 207: 107335. https://dx.doi.org/10.1016/j.ecoleng.2024.107335, meer Stoorvogel, M.; Temmerman, S.; Oosterlee, L.; Schoutens, K.; Maris, T.; van de Koppel, J.; Meire, P.; Bouma, T. (2024). Nature‐based shoreline protection in newly formed tidal marshes is controlled by tidal inundation and sedimentation rate. Limnol. Oceanogr. 69(10): 2377-2390. https://dx.doi.org/10.1002/lno.12676, meer van der Kaaden, A.-S.; Maier, S.R.; Chen, S.; De Clippele, L.H.; de Froe, E.; Gerkema, T.; van de Koppel, J.; Mienis, F.; Mohn, C.; Rietkerk, M.; Soetaert, K.; van Oevelen, D. (2024). Building your own mountain: the effects, limits, and drawbacks of cold-water coral ecosystem engineering. Biogeosciences 21(4): 973-992. https://dx.doi.org/10.5194/bg-21-973-2024, meer van der Kaaden, A.-S.; van Oevelen, D.; Mohn, C.; Soetaert, K.; Rietkerk, M.; van de Koppel, J.; Gerkema, T. (2024). Resemblance of the global depth distribution of internal-tide generation and cold-water coral occurrences. Ocean Science Journal 20(2): 569-587. https://dx.doi.org/10.5194/os-20-569-2024, meer Zhao, Z.; Capelle, J.; de Smit, J.; Gerkema, T.; van de Koppel, J.; Yuan, L.; Bouma, T. (2024). Boosting efficiency of mussel spat collection for ecological sustainability: Identifying critical drivers and informing management. J. Appl. Ecol. 61(7): 1691-1702. https://dx.doi.org/10.1111/1365-2664.14696, meer Schotanus, J.; Walles, B.; Capelle, J.J.; van de Koppel, J.; Bouma, T.J. (2023). Identifying how restoration measures influence the presence of shorebirds: a case study on the use of artificial structures for restoring mussel reefs. Restor. Ecol. 32(1). https://dx.doi.org/10.1111/rec.14051, meer Siteur, K.; Liu, Q-X; Rottschäfer, V.; van der Heide, T.; Rietkerk, M.; Doelman, A.; Boström, C.; van de Koppel, J. (2023). Phase-separation physics underlies new theory for the resilience of patchy ecosystems. Proc. Natl. Acad. Sci. U.S.A. 120(2): e2202683120. https://dx.doi.org/10.1073/pnas.2202683120, meer van de Vijsel, R.C.; van Belzen, J.; Bouma, T.J.; van der Wal, D.; Borsje, B.W.; Temmerman, S.; Cornacchia, L.; Gourgue, O.; van de Koppel, J. (2023). Vegetation controls on channel network complexity in coastal wetlands. Nature Comm. 14(1): 7158. https://dx.doi.org/10.1038/s41467-023-42731-3, meer van der Kaaden, A.-S.; Maier, S.R.; Siteur, K.; De Clippele, L.H.; van de Koppel, J.; Purkis, S.J.; Rietkerk, M.; Soetaert, K.; van Oevelen, D. (2023). Tiger reefs: Self‐organized regular patterns in deep‐sea cold‐water coral reefs. Ecosphere 14(10). https://dx.doi.org/10.1002/ecs2.4654, meer Vozzo, M.L.; Doropoulos, C.; Silliman, B.R.; Steven, A.; Reeves, S.E.; ter Hofstede, R.; van Koningsveld, M.; van de Koppel, J.; McPherson, T.; Ronan, M.; Saunders, M.I. (2023). To restore coastal marine areas, we need to work across multiple habitats simultaneously. Proc. Natl. Acad. Sci. U.S.A. 120(26): e2300546120. https://dx.doi.org/10.1073/pnas.2300546120, meer Xu, C.; Silliman, B.R.; Chen, J.; Li, X.; Thomsen, M.S.; Zhang, Q.; Lee, J.; Lefcheck, J.S.; Daleo, P.; Hughes, B.B.; Jones, H.P.; Wang, R.; Wang, S.; Smith, C.S.; Xi, X.; Altieri, A.H.; van de Koppel, J.; Palmer, T.M.; Liu, L.; Wu, J.; Li, B.; He, Q. (2023). Herbivory limits success of vegetation restoration globally. Science (Wash.) 382(6670): 589-594. https://dx.doi.org/10.1126/science.add2814, meer Zhang, K.; Yan, J.; He, Q.; Xu, C.; Van de Koppel, J.; Wang, B.; Cui, B.; Liu, Q.-X. (2023). Self-organized mud cracking amplifies the resilience of an iconic “Red Beach” salt marsh. Science Advances 9(18): eabq3520. https://dx.doi.org/10.1126/sciadv.abq3520, meer Gourgue, O.; van Belzen, J.; Schwarz, C.; Vandenbruwaene, W.; Vanlede, J.; Belliard, J.-P.; Fagherazzi, S.; Bouma, T.J.; van de Koppel, J.; Temmerman, S. (2022). Biogeomorphic modeling to assess the resilience of tidal-marsh restoration to sea level rise and sediment supply. Earth Surface Dynamics 10(3): 531-553. https://dx.doi.org/10.5194/esurf-10-531-2022, meer Temmink, R.J.M.; Lamers, L.P.M.; Angelini, C.; Bouma, T.J.; Fritz, C.; Van de Koppel, J.; Lexmond, R.; Rietkerk, M.; Silliman, B.R.; Joosten, H.; van der Heide, T. (2022). Recovering wetland biogeomorphic feedbacks to restore the world’s biotic carbon hotspots. Science (Wash.) 376(6593): eabn1479. https://dx.doi.org/10.1126/science.abn1479, meer Wang, B.; Zhang, K.; Liu, Q.-X.; Gao, Q.; van de Koppel, J.; Teng, S.N.; Miao, X.; Liu, M.; Bertness, M.D.; Xu, C. (2022). Long-distance facilitation of coastal ecosystem structure and resilience. Proc. Natl. Acad. Sci. U.S.A. 119(28): e2123274119. https://dx.doi.org/10.1073/pnas.2123274119, meer Cao, H.; Zhu, Z.; van Belzen, J.; Gourgue, O.; van de Koppel, J.; Temmerman, S.; Herman, P.M.J.; Zhang, L.; Yuan, L.; Bouma, T.J. (2021). Salt marsh establishment in poorly consolidated muddy systems: effects of surface drainage, elevation, and plant age. Ecosphere 12(9): e03755. https://dx.doi.org/10.1002/ecs2.3755, meer Gourgue, O.; van Belzen, J.; Schwarz, C.; Bouma, T.J.; van de Koppel, J.; Temmerman, S. (2021). A convolution method to assess subgrid‐scale interactions between flow and patchy vegetation in biogeomorphic models. J. Adv. Model. Earth Syst. 13(2): e2020MS002116. https://doi.org/10.1029/2020MS002116, meer Hensel, M.J.S.; Silliman, B.R.; van de Koppel, J.; Hensel, E.; Sharp, S.J.; Crotty, S.M.; Byrnes, J.E.K. (2021). A large invasive consumer reduces coastal ecosystem resilience by disabling positive species interactions. Nature Comm. 12: 6290. https://dx.doi.org/10.1038/s41467-021-26504-4, meer Li, A.; Matsuoka, N.; Niu, F.; Chen, J.; Ge, Z.; Hu, W.; Li, D.; Hallet, B.; van de Koppel, J.; Goldenfeld, N.; Liu, Q.-X. (2021). Ice needles weave patterns of stones in freezing landscapes. Proc. Natl. Acad. Sci. U.S.A. 118(40): e2110670118. https://dx.doi.org/10.1073/pnas.2110670118, meer Neijnens, F.K.; Siteur, K.; van de Koppel, J.; Rietkerk, M. (2021). Early warning signals for rate-induced critical transitions in salt marsh ecosystems. Ecosystems 24: 1825-1836. https://doi.org/10.1007/s10021-021-00610-2, meer Qiu, D.; Cui, B.; Ma, X.; Yan, J.; Cai, Y.; Xie, T.; Gao, F.; Wang, F.; Sui, H.; Bai, J.; van de Koppel, J.; Olff, H. (2021). Reciprocal facilitation between annual plants and burrowing crabs: Implications for the restoration of degraded saltmarshes. J. Ecol. 109(4): 1828-1841. https://doi.org/10.1111/1365-2745.13608, meer Reijers, V.C; Hoeks, S.; van Belzen, J.; Siteur, K.; de Rond, A.J.A.; van de Ven, C.N.; Lammers, C.; van de Koppel, J.; van der Heide, T. (2021). Sediment availability provokes a shift from Brownian to Lévy‐like clonal expansion in a dune building grass. Ecol. Lett. 24(2): 258-268. https://doi.org/10.1111/ele.13638, meer Ren, J.; Chen, J.; Xu, C.; Van de Koppel, J.; Thomsen, M.S.; Qiu, S.; Cheng, F.; Song, W.; Liu, Q.-X.; Xu, C.; Bai, J.; Zhang, Y.; Cui, B.; Bertness, M.D.; Silliman, B.R.; Li, B.; He, Q. (2021). An invasive species erodes the performance of coastal wetland protected areas. Science Advances 7(42): eabi8943. https://dx.doi.org/10.1126/sciadv.abi8943, meer Rietkerk, M.; Bastiaansen, R.; Banerjee, S.; van de Koppel, J.; Baudena, M.; Doelman, A. (2021). Evasion of tipping in complex systems through spatial pattern formation. Science (Wash.) 374(6564): eabj0359. https://dx.doi.org/10.1126/science.abj0359, meer Sherratt, J.A.; Liu, Q.-X.; van de Koppel, J. (2021). A comparison of the “Reduced Losses” and “Increased Production” models for Mussel Bed Dynamics. Bulletin of Mathematical Biology 83(10). https://dx.doi.org/10.1007/s11538-021-00932-1, meer van de Vijsel, R.C.; van Belzen, J.; Bouma, T.J.; van der Wal, D.; van de Koppel, J. (2021). Algal‐induced biogeomorphic feedbacks lay the groundwork for coastal wetland development. JGR: Biogeosciences 126(10): e2021JG006515. https://dx.doi.org/10.1029/2021jg006515, meer van der Heide, T.; Temmink, R.J.M.; Fivash, G.S.; Bouma, T.J.; Boström, C.; Didderen, K.; Esteban, N.; Gaeckle, J.; Gagnon, K.; Infantes, E.; van de Koppel, J.; Lengkeek, W.; Unsworth, R.; Christianen, M.J.A. (2021). Coastal restoration success via emergent trait-mimicry is context dependent. Biol. Conserv. 264: 109373. https://dx.doi.org/10.1016/j.biocon.2021.109373, meer van der Kaaden, A.-S.; Mohn, C.; Gerkema, T.; Maier, S.R.; de Froe, E.; van de Koppel, J.; Rietkerk, M.; Soetaert, K.; van Oevelen, D. (2021). Feedbacks between hydrodynamics and cold-water coral mound development. Deep-Sea Res., Part 1, Oceanogr. Res. Pap. 178: 103641. https://dx.doi.org/10.1016/j.dsr.2021.103641, meer van der Ouderaa, I.B.C.; Claassen, J.R.; van de Koppel, J.; Bishop, M.J.; Eriksson, B.K. (2021). Bioengineering promotes habitat heterogeneity and biodiversity on mussel reefs. J. Exp. Mar. Biol. Ecol. 540: 151561. https://dx.doi.org/10.1016/j.jembe.2021.151561, meer Zardi, G.I.; Nicastro, K.R.; McQuaid, C.D.; de Jager, M.; van de Koppel, J.; Seuront, L. (2021). Density-dependent and species-specific sffects on self-organization modulate the resistance of mussel bed ecosystems to hydrodynamic stress. American Naturalist 197(5): 615-623. https://doi.org/10.1086/713738, meer Zhao, L.-X.; Zhang, K.; Siteur, K.; Li, X.-Z.; Liu, Q.-X.; van de Koppel, J. (2021). Fairy circles reveal the resilience of self-organized salt marshes. Science Advances 7(6): eabe1100. https://doi.org/10.1126/sciadv.abe1100, meer Bertolini, C.; Capelle, J.J.; Ter Veld, J.; van de Koppel, J.; Bouma, T.J. (2020). Understanding scales of density-dependence to improve the use of resources in benthic mussel aquaculture. Aquaculture 528: 735477. https://dx.doi.org/10.1016/j.aquaculture.2020.735477, meer de Jager, M.; van de Koppel, J.; Weerman, E.J.; Weissing, F.J. (2020). Patterning in mussel beds explained by the interplay of multi-level selection and spatial self-organization. Front. Ecol. Evol. 8: 7. https://dx.doi.org/10.3389/fevo.2020.00007, meer Gagnon, K.; Rinde, E.; Bengil, E.G.T.; Carugati, L.; Christianen, M.J.A.; Danovaro, R.; Gambi, C.; Govers, L.L.; Kipson, S.; Meysick, L.; Pajusalu, L.; Tüney Kizilkaya, I.; van de Koppel, J.; van der Heide, T.; van Katwijk, M.M.; Boström, C. (2020). Facilitating foundation species: The potential for plant–bivalve interactions to improve habitat restoration success. J. Appl. Ecol. 57(6): 1161-1179. https://dx.doi.org/10.1111/1365-2664.13605, meer Schotanus, J.; Walles, B.; Capelle, J.J.; van Belzen, J.; van de Koppel, J.; Bouma, T.J. (2020). Promoting self‐facilitating feedback processes in coastal ecosystem engineers to increase restoration success: Testing engineering measures. J. Appl. Ecol. 57(10): 1958-1968. https://dx.doi.org/10.1111/1365-2664.13709, meer van de Vijsel, R.C.; van Belzen, J.; Bouma, T.J.; van der Wal, D.; Cusseddu, V.; Purkis, S.J.; Rietkerk, M.; van de Koppel, J. (2020). Estuarine biofilm patterns: modern analogues for Precambrian self‐organization. Earth Surf. Process. Landforms 45(5): 1141-1154. https://dx.doi.org/10.1002/esp.4783, meer van der Kaaden, A.-S.; van Oevelen, D.; Rietkerk, M.; Soetaert, K.; van de Koppel, J. (2020). Spatial self-organization as a new perspective on cold-water coral mound development. Front. Mar. Sci. 7: article 631. https://dx.doi.org/10.3389/fmars.2020.00631, meer Yan, J.; van der Heide, T.; Cui, B.; Bai, J.; Ysebaert, T.; van de Koppel, J. (2020). A healthy trophic structure underlies the resistance of pristine seagrass beds to nutrient enrichment. Limnol. Oceanogr. 65(11): 2748-2756. https://dx.doi.org/10.1002/lno.11545, meer Zhu, Z.; Vuik, V.; Visser, P.J.; Soens, T.; van Wesenbeeck, B.K.; van de Koppel, J.; Jonkman, S.N.; Temmerman, S.; Bouma, T.J. (2020). Historic storms and the hidden value of coastal wetlands for nature-based flood defence. Nature Sustainability 3(10): 853-862. https://dx.doi.org/10.1038/s41893-020-0556-z, meer Zhu, Z.; van Belzen, J.; Zhu, Q.; van de Koppel, J.; Bouma, T.J. (2020). Vegetation recovery on neighboring tidal flats forms an Achilles' heel of saltmarsh resilience to sea level rise. Limnol. Oceanogr. 65(1): 51-62. https://dx.doi.org/10.1002/lno.11249, meer Bertolini, C.; Cornelissen, B.; Capelle, J.; van de Koppel, J.; Bouma, T.J. (2019). Putting self‐organization to the test: labyrinthine patterns as optimal solution for persistence. Oikos (Kbh.) 128(12): 1805-1815. https://dx.doi.org/10.1111/oik.06373, meer Bertolini, C.; Capelle, J.; Timmermans, K.; Bouma, T.J.; van de Koppel, J. (2019). Timing it right: Non-consumptive effects on prey recruitment magnify overtime. J. Exp. Mar. Biol. Ecol. 513: 47-54. https://doi.org/10.1016/j.jembe.2019.03.001, meer Bertolini, C.; Hlebowicz, K.; Schlichta, F.; Capelle, J.J.; van de Koppel, J.; Bouma, T.J. (2019). Are all patterns created equal? Cooperation is more likely in spatially simple habitats. Mar. Ecol. (Berl.) 40(6): e12572. https://dx.doi.org/10.1111/maec.12572, meer Cornacchia, L.; Licci, S.; Nepf, H.; Folkard, A.; van der Wal, D.; van de Koppel, J.; Puijalon, S.; Bouma, T.J. (2019). Turbulence-mediated facilitation of resource uptake in patchy stream macrophytes. Limnol. Oceanogr. 64(2): 714-727. https://dx.doi.org/10.1002/lno.11070, meer Cornacchia, L.; Folkard, A.; Davies, G.; Grabowski, R.C.; van de Koppel, J.; van der Wal, D.; Wharton, G.; Puijalon, S.; Bouma, T.J. (2019). Plants face the flow in V formation: A study of plant patch alignment in streams. Limnol. Oceanogr. 64(3): 1087-1102. https://doi.org/10.1002/lno.11099, meer Cornacchia, L.; van der Wal, D.; van de Koppel, J.; Puijalon, S.; Wharton, G.; Bouma, T.J. (2019). Flow-divergence feedbacks control propagule retention by in-stream vegetation: the importance of spatial patterns for facilitation. Aquat. Sci. 81(1): 17. https://dx.doi.org/10.1007/s00027-018-0612-1, meer He, Q.; Silliman, B.R.; van de Koppel, J.; Cui, B. (2019). Weather fluctuations affect the impact of consumers on vegetation recovery following a catastrophic die-off. Ecology 100(1): e02559. https://doi.org/10.1002/ecy.2559 , meer Reijers, V.C.; Siteur, K.; Hoeks, S.; van Belzen, J.; Borst, A.C.W.; Heusinkveld, J.H.T.; Govers, L.; Bouma, T.J.; Lamers, L.P.M.; van de Koppel, J.; van der Heide, T. (2019). A Lévy expansion strategy optimizes early dune building by beach grasses. Nature Comm. 10: 2656. https://dx.doi.org/10.1038/s41467-019-10699-8, meer Reijers, V.C.; Cruijsen; Hoetjes; Akker; Heusinkveld, J.H.T.; van de Koppel, J.; Lamers, L.P.M.; Olff, H.; van der Heide, T. (2019). Loss of spatial structure after temporary herbivore absence in a high‐productivity reed marsh. J. Appl. Ecol. 56(7): 1817-1826. https://dx.doi.org/10.1111/1365-2664.13394, meer Schotanus, J.; Capelle, J.J.; Leuchter, L.; van de Koppel, J.; Bouma, T.J. (2019). Mussel seed is highly plastic to settling conditions: the influence of waves versus tidal emergence. Mar. Ecol. Prog. Ser. 624: 77-87. https://dx.doi.org/10.3354/meps13039, meer Siero, E.; Siteur, K.; Doelman, A.; van de Koppel, J.; Rietkerk, M.; Eppinga, M.B. (2019). Grazing away the resilience of patterned ecosystems. American Naturalist 193(3): 472-480. https://dx.doi.org/10.1086/701669, meer Silliman, B.R.; He, Q.; Angelini, C.; Smith, C.S.; Kirwan, M.L.; Daleo, P.; Renzi, J.J.; Butler, J.; Osborne, T.Z.; Nifong, J.C.; van de Koppel, J. (2019). Field experiments and meta-analysis reveal wetland vegetation as a crucial element in the coastal protection paradigm. Curr. Biol. 29(11): 1800-1806.e3. https://dx.doi.org/10.1016/j.cub.2019.05.017, meer Zhao, L.-X.; Xu, C.; Ge, Z.-M.; van de Koppel, J.; Liu, Q.-X. (2019). The shaping role of self-organization: linking vegetation patterning, plant traits and ecosystem functioning. Proc. - Royal Soc., Biol. Sci. 286(1900): 20182859. https://dx.doi.org/10.1098/rspb.2018.2859, meer Cornacchia, L.; van de Koppel, J.; van der Wal, D.; Wharton, G.; Puijalon, S.; Bouma, T.J. (2018). Landscapes of facilitation: how self-organized patchiness of aquatic macrophytes promotes diversity in streams. Ecology 99(4): 832-847. https://doi.org/10.1002/ecy.2177 , meer de Fouw, J; van der Heide, T.; van Belzen, J.; Govers, L.; Cheikh, M.A.S.; Olff, H.; van de Koppel, J.; van Gils, J.A. (2018). A facultative mutualistic feedback enhances the stability of tropical intertidal seagrass beds. NPG Scientific Reports 8(1): 10. https://doi.org/10.1038/s41598-018-31060-x, meer Nieuwhof, S.; van Belzen, J.; Oteman, B.; van de Koppel, J.; Herman, P.M.J.; van der Wal, D. (2018). Shellfish reefs increase water storage capacity on intertidal flats over extensive spatial scales. Ecosystems 21(2): 360-372. https://dx.doi.org/10.1007/s10021-017-0153-9, meer Schwarz, C.; Gourgue, O.; van Belzen, J.; Zhu, Z.; Bouma, T.J.; van de Koppel, J.; Ruessink, G.; Claude, N.; Temmerman, S. (2018). Self-organization of a biogeomorphic landscape controlled by plant life-history traits. Nature Geoscience 11(7): 672-677. https://doi.org/10.1038/s41561-018-0180-y, meer de Jager, M.; Weissing, F.J.; van de Koppel, J. (2017). Why mussels stick together: spatial self-organization affects the evolution of cooperation. Evolutionary Ecology 31(4): 547-558. https://dx.doi.org/10.1007/s10682-017-9888-1, meer de Paoli, H.C.; van der Heide, T.; van den Berg, A.; Silliman, B.R.; Herman, P.M.J.; van de Koppel, J. (2017). Behavioral self-organization underlies the resilience of a coastal ecosystem. Proc. Natl. Acad. Sci. U.S.A. 114(30): 8035-8040. https://dx.doi.org/10.1073/pnas.1619203114, meer Eriksson, B.K.; Westra, J.; van Gerwen, I.; Weerman, E.; van der Zee, E.; van der Heide, T.; van de Koppel, J.; Olff, H.; Piersma, T.; Donadi, S. (2017). Facilitation by ecosystem engineers enhances nutrient effects in an intertidal system. Ecosphere 8(12): e02051. https://dx.doi.org/10.1002/ecs2.2051, meer Howison, R.A.; Olff, H.; van de Koppel, J.; Smit, C. (2017). Biotically driven vegetation mosaics in grazing ecosystems: the battle between bioturbation and biocompaction. Ecol. Monogr. 87(3): 363-378. https://dx.doi.org/10.1002/ecm.1259, meer Schwarz, C.; Cox, T.; van Engeland, T.; van Oevelen, D.; van Belzen, J.; van de Koppel, J.; Soetaert, K.; Bouma, T.J.; Meire, P.; Temmerman, S. (2017). Field estimates of floc dynamics and settling velocities in a tidal creek with significant along-channel gradients in velocity and SPM. Est., Coast. and Shelf Sci. 197: 221-235. https://dx.doi.org/10.1016/j.ecss.2017.08.041, meer van Belzen, J.; van de Koppel, J.; Kirwan, M.L.; van der Wal, D.; Herman, P.M.J.; Dakos, V.; Kéfi, S.; Scheffer, M.; Guntenspergen, G.R.; Bouma, T.J. (2017). Vegetation recovery in tidal marshes reveals critical slowing down under increased inundation. Nature Comm. 8: 15811. https://doi.org/10.1038/ncomms15811, meer Angelini, C.; Griffin, J.N.; van de Koppel, J.; Lamers, L.P.M.; Smolders, A.J.P.; Derksen-Hooijberg, M.; van der Heide, T.; Silliman, B.R. (2016). A keystone mutualism underpins resilience of a coastal ecosystem to drought. Nature Comm. 7: 12473. dx.doi.org/10.1038/NCOMMS12473 , meer de Fouw, J.; Govers, L.; van de Koppel, J.; van Belzen, J.; Dorigo, W.; Sidi Cheikh, M.A.; Christianen, M.J.A.; van der Reijden, K.J.; van der Geest, M.; Piersma, T.; Smolders, A.J.P.; Olff, H.; Lamers, L.P.M.; van Gils, J.A.; van der Heide, T. (2016). Drought, mutualism breakdown, and landscape-scale degradation of seagrass beds. Curr. Biol. 26(8): 1051-1056. https://dx.doi.org/10.1016/j.cub.2016.02.023, meer Liu, Q-X; Rietkerk, M.; Herman, P.M.J.; Piersma, T.; Fryxell, J.M.; van de Koppel, J. (2016). Bridging physics and biology Reply to comments on “Phase separation driven by density-dependent movement: A novel mechanism for ecological patterns”. Physics of Life Reviews 19: 142-146. https://dx.doi.org/10.1016/j.plrev.2016.11.006, meer Liu, Q-X; Rietkerk, M.; Herman, P.M.J.; Piersma, T.; Fryxell, J.M.; van de Koppel, J. (2016). Phase separation driven by density-dependent movement: A novel mechanism for ecological patter. 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Oikos (Kbh.) 124: 1502–1510, meer Elschot, K.; Bakker, J.P.; Temmerman, S.; van de Koppel, J.; Bouma, T.J. (2015). Ecosystem engineering by large grazers enhances carbon stocks in a tidal salt marsh. Mar. Ecol. Prog. Ser. 537: 9-21. https://dx.doi.org/10.3354/meps11447, meer Kölzsch, A.; Alzate, A.; Bartumeus, F.; de Jager, M.; Weerman, E.; Hengeveld, G.M.; Naguib, M.; Nolet, B.A.; Van de Koppel, J. (2015). Experimental evidence for inherent Lévy search behaviour in foraging animals. Proc. - Royal Soc., Biol. Sci. 282(1807): 20150424. https://dx.doi.org/10.1098/rspb.2015.0424, meer Silliman, B.R.; Schrack, E.; He, Q.; Cope, R.; Santoni, A.; van der Heide, T.; Jacobi, R.; Jacobi, M.; van de Koppel, J. (2015). Facilitation shifts paradigms and can amplify coastal restoration efforts. Proc. Natl. Acad. Sci. U.S.A. 112(46): 14295-14300. dx.doi.org/10.1073/pnas.1515297112, meer van de Koppel, J.; van der Heide, T.; Altieri, A.H.; Eriksson, B.K.; Bouma, T.J.; Olff, H.; Silliman, B.R. 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Sci. 281(1774): 20132605. http://dx.doi.org/10.1098/rspb.2013.2605, meer Donadi, S.; van der Zee, E.M.; van der Heide, T.; Weerman, E.J.; Piersma, T.; van de Koppel, J.; Olff, H.; Bartelds, M.; van Gerwen, I.; Eriksson, B.K. (2014). The bivalve loop: Intra-specific facilitation in burrowing cockles through habitat modification. J. Exp. Mar. Biol. Ecol. 461: 44–52. dx.doi.org/10.1016/j.jembe.2014.07.019, meer Liu, Q.X.; Herman, P.M.J.; Mooij, W.M.; Huisman, J.; Scheffer, M.; Olff, H.; de Koppel, J. (2014). Pattern formation at multiple spatial scales drives the resilience of mussel bed ecosystems. Nature Comm. 5: 5234. https://dx.doi.org/10.1038/ncomms6234, meer Liu, Q.X.; Weerman, E.J.; Gupta, R.; Herman, P.M.J.; Olff, H.; van de Koppel, J. (2014). Biogenic gradients in algal density affect the emergent properties of spatially self-organized mussel beds. J. R. Soc. Interface 11(96): 20140089 . dx.doi.org/10.1098/rsif.2014.0089, meer Matthews, B.; De Meester, L.; Jones, C.G.; Ibelings, B.W.; Bouma, T.J.; Nuutinen, V.; van de Koppel, J.; Odling-Smee, J. (2014). Under niche construction: an operational bridge between ecology, evolution, and ecosystem science. Ecol. Monogr. 84(2): 245-263. https://dx.doi.org/10.1890/13-0953.1, meer Silliman, B.R.; Mozdzer, T.; Angelini, C.; Brundage, J.E.; Esselink, P.; Bakker, J.P.; Gedan, K.B.; van de Koppel, J.; Baldwin, A.H. (2014). Livestock as a potential biological control agent for an invasive wetland plant. PeerJ 2: e567. dx.doi.org/10.7717/peerj.567, meer van der Heide, T.; Tielens, E.; van der Zee, E.M.; Weerman, E.J.; Holthuijsen, S.; Eriksson, B.K.; Piersma, T.; van de Koppel, J.; Olff, H. (2014). Predation and habitat modification synergistically interact to control bivalve recruitment on intertidal mudflats. Biol. Conserv. 172: 163-169. https://dx.doi.org/10.1016/j.biocon.2014.02.036, meer Adams Krumins, J.; van Oevelen, D.; Bezemer, T.M.; de Deyn, G.B.; Hol, W.H.G.; van Donk, E.; de Boer, W.; de Ruiter, P.C.; Middelburg, J.J.; Monroy, F.; Soetaert, K.; Thébault, E.; van de Koppel, J.; van Veen, J.A.; Viketoft, M.; van der Putten, W.H. (2013). Soil and Freshwater and Marine Sediment Food Webs: Their Structure and Function. BioScience 63(1): 35-42. dx.doi.org/10.1525/bio.2013.63.1.8, meer Bouma, T.J.; Temmerman, S.; van Duren, L.A.; Martini, E.; Vandenbruwaene, W.; Callaghan, D.P.; Balke, T.; Biermans, G.; Klaassen, P.C.; van Steeg, R.; Dekker, F.; van de Koppel, J.; Herman, P.M.J.; de Vries, M.B. (2013). Organism traits determine the strength of scale-dependent bio-geomorphic feedbacks: A flume study on three intertidal plant species. Geomorphology (Amst.) 180-181: 57-65. https://dx.doi.org/10.1016/j.geomorph.2012.09.005, meer Donadi, S.; van der Heide, T.; van der Zee, E.M.; Eklöf, J.S.; van de Koppel, J.; Weerman, E.J.; Piersma, T.; Olff, H.; Eriksson, B.K. (2013). Cross-habitat interactions among bivalve species control community structure on intertidal flats. Ecology 94(2): 489-498. dx.doi.org/10.1890/12-0048.1, meer Donadi, S.; Westra, J.; Weerman, E.J.; van der Heide, T.; van der Zee, E.M.; van de Koppel, J.; Olff, H.; Piersma, T.; van der Veer, H.W.; Eriksson, B.K. (2013). Non-trophic Interactions Control Benthic Producers on Intertidal Flats. Ecosystems 16: 1325-1335. http://dx.doi.org/10.1007/s10021-013-9686-8, meer Liu, Q.X.; Doelman, A.; Rottschäfer, V.; de Jager, M.; Herman, P.M.J.; Rietkerk, M.; van de Koppel, J. (2013). Phase separation explains a new class of self-organized spatial patterns in ecological systems. Proc. Natl. Acad. Sci. U.S.A. 110(29): 11905-11910. dx.doi.org/10.1073/pnas.1222339110, meer Fagherazzi, S.; Kirwan, M.L.; Mudd, S.M.; Guntenspergen, G.R.; Temmerman, S.; D'Alpaos, A.; van de Koppel, J.; Rybczyk, J.M.; Reyes, E.; Craft, C.; Clough, J. (2012). Numerical models of salt marsh evolution: ecological, geomorphic, and climatic factors. Rev. Geophys. 50(1). http://dx.doi.org/10.1029/2011RG000359, meer Liu, Q.X.; Weerman, E.J.; Herman, P.M.J.; Olff, H.; van de Koppel, J. (2012). Alternative mechanisms alter the emergent properties of self-organization in mussel beds. Proc. - Royal Soc., Biol. Sci. 279(1739): 2744-2753. dx.doi.org/10.1098/rspb.2012.0157, meer Scheffer, M.; Carpenter, S.R.; Lenton, T.M.; Bascompte, J.; Brock, W.; Dakos, V.; van de Koppel, J.; van de Leemput, I.A.; Levin, S.A.; van Nes, E.H.; Pascual, M.; Vandermeer, J. (2012). Anticipating Critical Transitions. Science (Wash.) 338(6105): 344-348. dx.doi.org/10.1126/science.1225244, meer Silliman, B.R.; van de Koppel, J.; McCoy, M.W.; Diller, J.; Kasozi, G.N.; Earl, K.; Adams, P.N.; Zimmerman, A.R. (2012). Degradation and resilience in Louisiana salt marshes after the BP-Deepwater Horizon oil spill. Proc. Natl. Acad. Sci. U.S.A. 109(28): 11234-11239. dx.doi.org/10.1073/pnas.1204922109, meer Van de Koppel, J.; Bouma, T.J.; Herman, P.M.J. (2012). The influence of local- and landscape-scale processes on spatial self-organization in estuarine ecosystems. J. Exp. Biol. 215(6): 962-967. dx.doi.org/10.1242/jeb.060467, meer van der Heide, T.; Govers, L.L.; de Fouw, J.; Olff, H.; van der Geest, M.; van Katwijk, M.M.; Piersma, T.; van de Koppel, J.; Silliman, B.R.; Smolders, A.J.P.; van Gils, J.A. (2012). A three-stage symbiosis forms the foundation of seagrass ecosystems. Science (Wash.) 336(6087): 1432-1434. dx.doi.org/10.1126/science.1219973, meer Wang, R.H.; Jin, Z.; Liu, Q.X.; van de Koppel, J.; Alonso, D. (2012). A Simple Stochastic Model with Environmental Transmission Explains Multi-Year Periodicity in Outbreaks of Avian Flu. PLoS One 7(2): e28873. dx.doi.org/10.1371/journal.pone.0028873, meer Weerman, E.J.; Van Belzen, J.; Rietkerk, M.; Temmerman, S.; Kéfi, S.; Herman, P.M.J.; Van de Koppel, J. (2012). Changes in diatom patch-size distribution and degradation in a spatially self-organized intertidal mudflat ecosystem. Ecology 93(3): 608-618. dx.doi.org/10.1890/11-0625.1, meer Weerman, E.J.; Herman, P.M.J.; Van de Koppel, J. (2011). Macrobenthos abundance and distribution on a spatially patterned intertidal flat. Mar. Ecol. Prog. Ser. 440: 95-103. dx.doi.org/10.3354/meps09332, meer Eriksson, B.K.; van der Heide, T.; van de Koppel, J.; Piersma, T.; van der Veer, H.W.; Olff, H. (2010). Major changes in the ecology of the Wadden Sea: Human impacts, ecosystem engineering and sediment dynamics. Ecosystems 13(5): 752-764. https://dx.doi.org/10.1007/s10021-010-9352-3, meer van de Koppel, J.; Gascoigne, J.C.; Theraulaz, G.; Rietkerk, M.; Mooij, W.M.; Herman, P.M.J. (2008). Experimental evidence for spatial self-organization and its emergent effects in mussel bed ecosystems. Science (Wash.) 322(5902): 739-742, meer Temmerman, S.; Bouma, T.J.; van de Koppel, J.; van der Wal, D.; de Vries, M.B.; Herman, P.M.J. (2007). Vegetation causes channel erosion in a tidal landscape. Geology (Boulder Colo.) 35(7): 631-634, meer Van de Koppel, J.; van der Wal, D.; Bakker, J.P.; Herman, P.M.J. (2005). Self-Organization and Vegetation Collapse in Salt Marsh Ecosystems. American Naturalist 165(1): E1-E12, meer van de Koppel, J.; Herman, P.M.J.; Thoolen, P.; Heip, C.H.R. (2001). Do alternate stable states occur in natural ecosystems? Evidence from a tidal flat. 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Peer reviewed publicaties (2) [show]
Cornacchia, L.; Wharton, G.; Davies, G.; Grabowski, R.C.; Temmerman, S.; van der Wal, D.; Bouma, T.J.; van de Koppel, J. (2020). Self-organization of river vegetation leads to emergent buffering of river flows and water levels. Proc., Sect. B Biol. Sci. 287(1931): 20201147. https://doi.org/10.1098/rspb.2020.1147, meer Onrust, B.; Bidarra, B.; Rooseboom, R.; van de Koppel, J. (2017). Ecologically Sound Procedural Generation of Natural Environments. International Journal of Computer Games Technology 2017: 7057141. https://dx.doi.org/10.1155/2017/7057141, meer
Boekhoofdstukken (9) [show]
Beninger, P.G.; Cuadrado, D.; van de Koppel, J. (2018). Sedimentary and biological patterns on mudflats, in: Beninger, P.G. Mudflat ecology. Aquatic Ecology Series, 7: pp. 185-211. https://doi.org/10.1007/978-3-319-99194-8_8, meer Gourgue, O.; van Belzen, J.; Schwarz, C.; Bouma, T.J.; van de Koppel, J.; Meire, P.; Temmerman, S. (2017). Challenges to the numerical modelling of large-scale intertidal wetlands, in: Schelde-Ems workshop 2017. pp. 11, meer Cornacchia, L.; Licci, S.; van de Koppel, J.; van der Wal, D.; Wharton, G.; Puijalon, S.; Bouma, T.J. (2016). Flow Velocity and Morphology of a Submerged Patch of the Aquatic Species Veronica anagallis-aquatica L., in: Rowinski, P. et al. Hydrodynamic and Mass Transport at Freshwater Aquatic Interfaces : 34th International School of Hydraulics. pp. 141-152, meer Altieri, A.H.; Van de Koppel, J. (2014). Foundation species in marine ecosystems, in: Bertness, M.D. et al. Marine community ecology and conservation. , meer Biere, J.; Van Andel, J.; van de Koppel, J. (2012). Populations: Ecology and genetics, in: Van Andel, J. et al. (Ed.) (2006). Restoration ecology: the new frontier. pp. 73-87, meer van de Koppel, J.; Van Andel, J.; Biere, J. (2012). Ecology of ecosystems and biotic communities, in: Van Andel, J. et al. (Ed.) (2006). Restoration ecology: the new frontier. pp. 59-72, meer Bakker, J.P.; Bouma, T.J.; De Groot, A.V.; De Meijer, R.J.; Herman, P.M.J.; van de Koppel, J.; van der Graaf, E.R.; van Wesenbeeck, B.K. (2011). Mechanisms involved in salt-marsh rejuvenation, in: Heip, C. et al. (Ed.) Aspects of coastal research in contribution to LOICZ in the Netherlands and Flanders (2002-2010). LOICZ Research & Studies, 38: pp. 70-82, meer van de Koppel, J.; Tett, P.; Naqvi, W.; Oguz, T.; Perillo, G.M.E.; Rabalais, N.N.; d'Alcalà, M.R.; Su, J.; Zhang, J. (2008). Threshold effects in semi-enclosed marine systems, in: Urban Jr., E.R. et al. (Ed.) Watersheds, bays, and bounded seas: The science and management of semi-enclosed marine systems. Scientific Committee on Problems of the Environment (SCOPE) Series, 70: pp. 31-47, meer de Deckere, E.M.G.T.; van de Koppel, J.; Heip, C.H.R. (2000). The influence of Corophium volutator abundance on resuspension, in: Liebezeit, G. et al. Life at Interfaces and Under Extreme Conditions: Proceedings of the 33rd European Marine Biology Symposium, Wilhelmshaven, Germany, 7-11 September 1998. Developments in Hydrobiology, 151: pp. 37-42. https://dx.doi.org/10.1007/978-94-011-4148-2_3, meer
Abstracts (2) [show]
Gourgue, O.; van Belzen, J.; Schwarz, C.; Bouma, T.J.; van de Koppel, J.; Temmerman, S. (2019). A new bio-geomorphic model approach accounting for subgrid-scale heterogeneity of biogenic structures, in: Mees, J. et al. (Ed.) Book of abstracts – VLIZ Marine Science Day. Bredene, Belgium, 13 March 2019. VLIZ Special Publication, 83: pp. 40, meer van de Vijsel, R.C.; van Belzen, J.; Bouma, T.J.; van der Wal, D.; van de Koppel, J. (2017). Do algae boost landscape formation?, in: Baptist, M. et al. (Ed.) NCK days 2017, 15 – 17 March, Royal Netherlands Naval College (KIM), Den Helder: book of abstracts. pp. 28, meer
Rapport [show]
Gons, H.; Leveau, J.; Rienks, F.; van de Koppel, J. (2006). Netherlands Institute of Ecology (NIOO-KNAW): Progress report 2003-2005. NIOO/KNAW: The Netherlands. 132 pp., meer
Overige publicaties (2) [show]
van Belzen, J.; van de Koppel, J.; van der Wal, D.; Herman, P.M.J.; Dakos, V.; Kéfi, S.; Scheffer, M.; Bouma, T.J. (2017). Timing recovery of ecosystems in sequential remotely sensed and simulated data . Protocol Exchange June 2017. https://dx.doi.org/10.1038/protex.2017.038, meer van Belzen, J.; van de Koppel, J.; Kirwan, M.L.; Guntenspergen, G.R.; Bouma, T.J. (2017). Disturbance-recovery experiments to assess resilience of ecosystems along a stress gradient . Protocol Exchange June 2017. https://dx.doi.org/10.1038/protex.2017.028, meer
Thesis (co-)promotor (6) [show]
van de Vijsel, R.C. (2021). Biophysical self-organization of coastal wetlands : Unraveling spatial complexity on tidal flats and marshes, from the Precambrian to today. PhD Thesis. University of Groningen: Groningen. 183 pp. https://hdl.handle.net/11370/45b1eea8-a2e4-4ea6-bad2-d544a3fc9745, meer Cornacchia, L. (2018). Emergent properties of bio-physical self-organization in streams. PhD Thesis. NIOZ: [s.l.]. ISBN 978-94-034-0347-2. 197 pp. https://hdl.handle.net/11370/612799da-932a-451e-aebb-ad676e974095, meer de Paoli, H.C. (2017). Restoring mussel bed: A guide on how to survive on an intertidal mudflat. PhD Thesis. Rijksuniversiteit Groningen: Groningen. ISBN 978-90-367-9583-8. 172 pp. hdl.handle.net/11370/2bc4de34-d756-4830-89d8-aa466ecbd21a, meer de Jager, M. (2015). Eco-evolutionary feedbacks in self-organized ecosystems. PhD Thesis. RUG: Groningen. ISBN 978-90-367-8153-4. 199 pp. https://hdl.handle.net/11370/4a1316a4-c764-4fae-8542-0e4776dc1fb2, meer Elschot, K. (2015). Effects of vegetation patterns and grazers on tidal marshes. PhD Thesis. RUG: Groningen. ISBN 978-90-367-8087-2. 147 pp. hdl.handle.net/11370/8f7cbf85-dbbf-41b8-98aa-6f328941dad6, meer Liu, X.-Q. (2013). The emergent properties of spatial self-organization: A study of patterned mussel beds. PhD Thesis. [S.n.]: [s.l.]. 167 pp. https://hdl.handle.net/11370/517542d8-1e27-47c7-99b4-fe4a9c0c8226, meer
Thesis begeleider (3) [show]
Chen, J. (2019). Identifying cold-water coral reef community composition variation from ROV video . Thesis. NIOZ Royal Netherlands Institute for Sea Research: Yerseke. 18 pp., meer Legrand, S. (2019). The influence of oysters on marsh structures by image processing : Studying the influence of oysters on creek structures in European and American marshes by image processing . MSc Thesis. NIOZ Royal Netherlands Institute for Sea Research: Yerseke. 63 pp., meer Legrand, S. (2019). The influence of oysters on marsh structures by image processing : Studying the influence of oysters on creek structures in European and American marshes by image processing . MSc Thesis. NIOZ Royal Netherlands Institute for Sea Research: Yerseke. 63 pp., meer

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