IMIS - Marine Research Groups

Sequenced genes (ureC gene) and a metagenome from Archaea in Arctic and Antarctic marine environments

Citation

Alonso-Saez L, Waller A, Bakker K, Farnelid H, Yager P, Lovejoy C, Tremblay J, Potvin M, Heinrich F, Estrada M, Riemann L, Bork P, Pedros-Alio C, Bertilsson S (2019): Sequenced genes (ureC gene) and a metagenome from Archaea in Arctic and Antarctic marine environments. v1.1. SCAR - Microbial Antarctic Resource System. Dataset/Metadata. https://ipt.biodiversity.aq/resource?r=arctic_antarctic_marine_archaea&v=1.1 https://doi.org/10.15468/ya3pzu

Contact: Alonso-Saez, Laura

Access data

Archived data

Availability:

This dataset is licensed under a Creative Commons Attribution 4.0 International License.

Description

Microbial dataset containing sequenced genes (ureC gene) from Thaumarchaeota from the Beaufort Sea (Arctic) and the Amundsen Sea (Antarctica), as well as a metagenome (454 pyrosequencing) the Beaufort Sea. more

Samples were collected by using a ship-deployed rosette for open water sampling and through the ship’s internal moon pool for winter ice-covered sampling.
Study Extent: Water samples were collected near the surface and in deeper halocline waters from the Arctic Southeast Beaufort Sea during the overwintering CFL cruise and in the upper 500 m from the Antarctic Amundsen and Ross seas during the summer in the Oden Southern Ocean cruise.
Method step description: details are given in: https://www.pnas.org/content/pnas/suppl/2012/09/27/1201914109.DCSupplemental/sapp.pdf

Scope

Keywords:

Marine/Coastal, Dna sequencing, Metadata, PSW, Amundsen Sea, Archaea

Geographical coverage

PSW, Amundsen Sea

Taxonomic coverage

Archaea [WoRMS]

Parameter

Molecular data

Contributors

Uppsala University, more, data creator

Alonso-Saez, Laura
Heinrich, Frederike
Bertilsson, Stefan